CDS

Accession Number TCMCG015C17824
gbkey CDS
Protein Id XP_027114861.1
Location join(67358786..67359018,67359828..67359903,67360739..67360901,67361088..67361201,67361777..67362009,67362402..67362722)
Gene LOC113732980
GeneID 113732980
Organism Coffea arabica

Protein

Length 379aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027259060.1
Definition putative high mobility group B protein 11 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category B
Description DNA binding
KEGG_TC -
KEGG_Module M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K03004        [VIEW IN KEGG]
ko:K09273        [VIEW IN KEGG]
ko:K11296        [VIEW IN KEGG]
ko:K11680        [VIEW IN KEGG]
ko:K11830        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0031011        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033202        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0042766        [VIEW IN EMBL-EBI]
GO:0043044        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045027        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060303        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070603        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097346        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1904949        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGAAATAAGAGGAATGCTTATGCAAGGATGAAGAAAATCAAGGAATGTGATGAGCATAATCAGAATCAGGATCACTCAGCTCAACGTTCTGATGATAAAAATGCTTGTGAGGAAGGGGTTTCGGAGAAGGCCATCACTGATCAGCAGAGTTTGGAAGAAAAGTCTGCTATTGATAATTTCTATGAAAAGCTTATCAAGTTGAATGAGTCCTCAGGGCTCAGTTTAGTCTTTAACTTCCGGGAAGCAAAAATGGACTTGCATCTTGTTTTCAAGGAAGTGACCGAGAGAGGGGGATCTTATCAGGTTTCAAAAGATGGGAAATGGAATGAAGTTGCATCCGCATTGAGTGTCAAAAATCATGCCCCCATCTTACCAAGTCAAATTCAAAAGGTTTATGAAAATCTCCTTTGCCAATATGAGCAAATACACCACTACAGGACTCCTGCAAAAGTGTCAAAACTGACAGGTGGTGATAGTTATGATTCCTTGCTCGGGAAGCGAAAATCCTGTGAATGCTGCTCTCAAGATTATGAAGCAGGAAAAAGGAAATGCATTCTTGATATTTATCAAGGATCATCAGTTCGAGCAGGGCCTGGAACACCAGAGCAGAAAACCACCTTCCAGACATCTTTGGATGAGGAAACAGTGATGAGACATATTTGTGCTCCACAAAAAGCAAGAAATTCATATCAGCTGTTTCTTAAGATGGAATGTCAGAGATTAAGGAAGATACACGGGGAAGCCTCTGGTAGCCGTAGCATAAGAGATAGGGCAATTGACGCATGGAAGCACCTTTCCGAAGATGATCGGCTGCCATATATTGAAGCAAGTAGGAAGGACAGAGAAAGATTTTACAGGGAGATGGCAGTTTACATGCAATATATTGACAAAAAGGTTCTGAAATCCGAGAATACGCTCAAGGATTCAGCTTCAGCCCTAATCAACTTTGGCCAGTCTTCACTAATAAATGATGATTATTATGTGACTTTGGAGGCTGATGCTGAAAACTTTTGTCTTCCCGATGAGTCATTGGTTGAATCAACCATTCAAATGTTGAAGACTCGACGACCCAGTGACCCCATGTTTCAGATGACTTGGGACGGGTTCCGTAGCCCTCCAGATACACCCAGTTGA
Protein:  
MGRNKRNAYARMKKIKECDEHNQNQDHSAQRSDDKNACEEGVSEKAITDQQSLEEKSAIDNFYEKLIKLNESSGLSLVFNFREAKMDLHLVFKEVTERGGSYQVSKDGKWNEVASALSVKNHAPILPSQIQKVYENLLCQYEQIHHYRTPAKVSKLTGGDSYDSLLGKRKSCECCSQDYEAGKRKCILDIYQGSSVRAGPGTPEQKTTFQTSLDEETVMRHICAPQKARNSYQLFLKMECQRLRKIHGEASGSRSIRDRAIDAWKHLSEDDRLPYIEASRKDRERFYREMAVYMQYIDKKVLKSENTLKDSASALINFGQSSLINDDYYVTLEADAENFCLPDESLVESTIQMLKTRRPSDPMFQMTWDGFRSPPDTPS